2023

Slezák, M., Douda, J., Hegedüšová Vantarová, K., Jarolímek, I., Kochjarová, J., Májeková, J., & Hrivnák, R. (2023). Soil toxicity and species dominance rather than nutrient availability drive plant species richness in swamp forests of Central Europe. Journal of Biogeography. https://doi.org/10.1111/jbi.14771

Černý, K., Vojta, J., Pecka, Š, Chumanová, E., Koukol, O., Douda, J., Boublík K., Doudová, J., Havrdová A. & Král, P. (2023). Invazní patogen ohrožuje lužní a mokřadní olšiny. Živa, 6, 279-282. 

Douda, J., Doudová, J., Holeštová, A., Chudomelová, M., Vild, O., Boublík, K., Černá, M., Havrdová, A., Petřík, P., Pychová, N., Smyčková, M., Šebesta, J., Vaníček, J. & Hédl, R. (2023). Historical sampling error: A neglected factor in long-term biodiversity
change research. Biological Conservation 286, 110317. 

Doudová, J., Douda, J., Boublík, K. & Prach, J. (2023). Odstraňování opadu jako opomíjený nástroj světlých lesů. Živa, 2, 62-66.  

Havrdová, A., Douda, J. & Doudová, J. (2023). Threats, biodiversity drivers and restoration in temperate floodplain forests related to spatial scales. Science of The Total Environment, 158743.

2022

Doudová, J., Douda, J. & Boublík, K. (2022). Traditional human practices protect diversity of open forests threatened by ticking nutrient time bomb. Biological Conservation, 275, 109758.  

Divíšek, J., Večeřa, M., Welk, E., Danihelka, J., Chytrý, K., Douda, J., & Chytrý, M. (2022). Origin of the central European steppe flora: insights from palaeodistribution modelling and migration simulations. Ecography, e06293.

Šmíd, J., Vít, P., Douda, J., Krak, K., & Mandák, B. (2022). Distribution, hybridisation and morphological variation in Alnus rohlenae (Betulaceae) an endemic species of the Balkan Peninsula. European Journal of Forest Research, 141(4), 641-648.

Slezák, M., Douda, J., Šibíková, M., Jarolímek, I., Senko, D., & Hrivnák, R. (2022). Topographic indices predict the diversity of Red List and non-native plant species in human-altered riparian ecosystems. Ecological Indicators, 139, 108949.

2021

Mandžukovski, D., Čarni, A., Biurrun, I., Douda, J., Škvorc, Ž., Stupar, V., Slezák, M., Ćušterevska, R., Rodríguez-González, P.M., Mendías C.S., Portela-Pereira, E., Vassilev, K., Milanovič, Đ., Kavgaci, A., Iakushenko, D., Pielech, R., Jasprica, N., González del Tánago, M., Dufour, S., Šibíková M., & Šibík, J. (in press). Manual for riparian alliances on European level, pp. 1-148.  

Douda, J., Havrdová, A., Doudová, J., Boublík, K., Černá, M., & Holeštová, A. (in prep.). Ztráta druhové diverzity lužních lesů a doporučení k její ochraně, pp. 1-42.

Douda, J., Doudová, J., Holeštová, A., Boublík, K., Havrdová, A., & Slezák, M. (2021). Interplay of above‐and belowground resource limitations: a competition–facilitation shift maintains species coexistence. Oikos, 130 (12), 2122-2135.

Holeštová, A., & Douda, J. (2021). Plant Species Over-Occupancy Indicates River Valleys Are Natural Corridors for Migration. Plant Ecology, 223 (1), 71-83.

2020

Doudová, J., & Douda, J. (2020). Along with the intraspecific functional trait variation, individual performance is key to resolving community assembly processes. Functional Ecology, 34 (11), 2362-2374.

Šmíd, J., Douda, J., Krak, K., & Mandák, B. (2020). Analyses of Hybrid Viability across a Hybrid Zone between Two Alnus Species Using Microsatellites and cpDNA Markers. Genes, 11(7), 770.

Douda, J., Havrdová, A., Janda, P., & Mandák, B. (2020). Molecular assessment of natural disturbance regime in a temperate swamp forest. Forest Ecology and Management, 460, 117821.

Vít, P., Krak, K., Douda, J., & Mandák, B. (2020). Microsatellite markers for Anthericum ramosum: Development, characterization, and cross‐species amplification. Applications in Plant Sciences, 8(2), e11323.

Douda, J., Doudová, J., Hodková, E., Vít, P., Krak, K., & Mandák, B. (2020). Population history explains the performance of an annual herb–Within and beyond its European species range. Journal of Ecology, 108(3), 958-968.

Krak, K., Vít, P., Douda, J., & Mandák, B. (2020). Development of 18 microsatellite markers for Salvia pratensis. Applications in Plant Sciences, 8(1), e11316.

2019

Chytrý, M., Hájek, M., Kočí, M., Pešout, P., Roleček, J., Sádlo, J., Šumberová, K., Sychra, J., Boublík, K., Douda, J., … & Chobot, K. (2019). Red list of habitats of the Czech Republic. Ecological Indicators, 106, 105446.

Hodková, E., Doudová, J., Douda, J., Krak, K., & Mandák, B. (2019). On the road: Postglacial history and recent expansion of the annual Atriplex tatarica in Europe. Journal of Biogeography, 46(11), 2609-2621.

Krak, K., Habibi, F., Douda, J., Vít, P., Lomonosova, M. N., Wang, L., & Mandák, B. (2019). Human‐mediated dispersal of weed species during the Holocene: A case study of Chenopodium album agg. Journal of Biogeography, 46(5), 1007-1019.

2018

Vojík, M., & Boublík, K. (2018). Fear of the dark: decline in plant diversity and invasion of alien species due to increased tree canopy density and eutrophication in lowland woodlands. Plant Ecology, 219(6), 749-758.

Mandák, B., Krak, K., Vít, P., Lomonosova, M. N., Belyayev, A., Habibi, F., Wang. L., Douda, J., & Štorchová, H. (2018). Hybridization and polyploidization within the Chenopodium album aggregate analysed by means of cytological and molecular markers. Molecular Phylogenetics and Evolution, 129, 189-201.

Douda, J., Doudová, J., Hulík, J., Havrdová, A., & Boublík, K. (2018). Reduced competition enhances community temporal stability under conditions of increasing environmental stress. Ecology, 99(10), 2207-2216.

Douda, J., Havrdová, A., Doudová, J., & Mandák, B. (2018). Legacy of post‐glacial colonization affects β‐diversity: Insights into local community assembly processes. Journal of Biogeography, 45(7), 1604-1615.

2017

Vít, P., Douda, J., Krak, K., Havrdová, A., & Mandák, B. (2017). Two new polyploid species closely related to Alnus glutinosa in Europe and North Africa–an analysis based on morphometry, karyology, flow cytometry and microsatellites. Taxon, 66(3), 567-583.

Douda, J., Boublík, K., Doudová, J., & Kyncl, M. (2017). Traditional forest management practices stop forest succession and bring back rare plant species. Journal of Applied Ecology, 54(3), 761-771.

Doudová, J., Douda, J., & Mandák, B. (2017). The complexity underlying invasiveness precludes the identification of invasive traits: a comparative study of invasive and non-invasive heterocarpic Atriplex congeners. PLoS One, 12(4), e0176455.

Hulík, J., & Douda, J. (2017). Germination strategies of two dominant Carex species in a swamp alder forest: implications for restoration. Biologia, 72(4), 370-377.

2016

Douda, J., Hulík, J., & Doudová, J. (2016). Vegetative sprouting as an additional pathway for a seed size-number trade-off: a field-parameterised simulation approach. Community Ecology, 17(2), 205-215.

Mandák, B., Krak, K., Vít, P., Pavlíková, Z., Lomonosova, M. N., Habibi, F., … & Douda, J. (2016). How genome size variation is linked with evolution within Chenopodium sensu lato. Perspectives in Plant Ecology, Evolution and Systematics, 23, 18-32.

Vít, P., Krak, K., Trávníček, P., Douda, J., Lomonosova, M. N., & Mandák, B. (2016). Genome size stability across Eurasian Chenopodium species (Amaranthaceae). Botanical Journal of the Linnean Society, 182(3), 637-649.

Krak, K., Vít, P., Belyayev, A., Douda, J., Hreusová, L., & Mandák, B. (2016). Allopolyploid origin of Chenopodium album s. str.(Chenopodiaceae): a molecular and cytogenetic insight. Plos One, 11(8), e0161063.

Mandák, B., Havrdová, A., Krak, K., Hadincová, V., Vít, P., Zákravský, P., & Douda, J. (2016). Recent similarity in distribution ranges does not mean a similar postglacial history: a phylogeographical study of the boreal tree species Alnus incana based on microsatellite and chloroplast DNA variation. New Phytologist, 210(4), 1395-1407.

Mandák, B., Vít, P., Krak, K., Trávníček, P., Havrdová, A., Hadincová, V., … & Douda, J. (2016). Flow cytometry, microsatellites and niche models reveal the origins and geographical structure of Alnus glutinosa populations in Europe. Annals of Botany, 117(1), 107-120.

Douda, J., Boublík, K., Slezák, M., Biurrun, I., Nociar, J., Havrdová, A., Doudová, J., … & Zimmermann, N. E. (2016). Vegetation classification and biogeography of European floodplain forests and alder carrs. Applied Vegetation Science, 19(1), 147-163.

2015

Havrdová, A., Douda, J., Krak, K., Vít, P., Hadincová, V., Zákravský, P., & Mandák, B. (2015). Higher genetic diversity in recolonized areas than in refugia of Alnus glutinosa triggered by continent‐wide lineage admixture. Molecular Ecology, 24(18), 4759-4777.

Havrdová, A., Douda, J., & Doudová, J. (2015). Local topography affects seed bank successional patterns in alluvial meadows. Flora-Morphology, Distribution, Functional Ecology of Plants, 217, 155-163.

2014

Świerkosz, K., Reczyńska, K., & Boublík, K. (2014). Variability of Abies alba-dominated forests in Central Europe. Central European Journal of Biology, 9(5), 495-518.

Drašnarová, A., Krak, K., Vít, P., Doudová, J., Douda, J., Hadincová, V., … & Mandák, B. (2014). Cross-amplification and multiplexing of SSR markers for Alnus glutinosa and A. incana. Tree Genetics & Genomes, 10(4), 865-873.

Svoboda, M., Janda, P., Bače, R., Fraver, S., Nagel, T. A., Rejzek, J., Mikolas, M., Douda, J., Boublík, K., & Lehejček, J. (2014). Landscape‐level variability in historical disturbance in primary Picea abies mountain forests of the Eastern Carpathians, Romania. Journal of Vegetation Science, 25(2), 386-401.

Douda, J., Doudová, J., Drašnarová, A., Kuneš, P., Hadincová, V., Krak, K., … & Mandak, B. (2014). Migration patterns of subgenus Alnus in Europe since the Last Glacial Maximum: a systematic review. PLoS One, 9(2), e88709.

2013

Valtera, M., Šamonil, P., & Boublik, K. (2013). Soil variability in naturally disturbed Norway spruce forests in the Carpathians: Bridging spatial scales. Forest Ecology and Management, 310, 134-146.

2012

Douda, J., Doudová-Kochánková, J., Boublík, K., & Drašnarová, A. (2012). Plant species coexistence at local scale in temperate swamp forest: test of habitat heterogeneity hypothesis. Oecologia, 169(2), 523-534.

Doudová-Kochánková, J., Plačková, I., Zákravský, P., Flégrová, M., & Mandák, B. (2012). The importance of phenotypic differentiation and plasticity in the range expansion of the annual Atriplex tatarica (Amaranthaceae). Flora-Morphology, Distribution, Functional Ecology of Plants, 207(10), 744-752.

2011

Hédl, R., Petřík, P., & Boublík, K. (2011). Long-term patterns in soil acidification due to pollution in forests of the Eastern Sudetes Mountains. Environmental Pollution, 159(10), 2586-2593.

Petřík, P., Černý, T., & Boublík, K. (2011). Impact of hoofed game and weather on the vegetation of endangered dry grasslands in the Křivoklátsko Biosphere Reserve (Czech Republic). Tuexenia, (31), 283-299.

Černý, T., Petřík, P., Boublík, K., Kolbek, J., & Adámek, M. (2011). Vegetation with Gagea bohemica in the landscape context. Plant Biosystems-An International Journal Dealing with all Aspects of Plant Biology, 145(3), 570-583.

2010

Boublík, K. (2010). Formalized classification of the vegetation of Abies alba-dominated forests in the Czech Republic. Biologia, 65(5), 822-831.

Douda, J. (2010). The role of landscape configuration in plant composition of floodplain forests across different physiographic areas. Journal of Vegetation Science, 21(6), 1110-1124.

2009

Douda, J., Čejková, A., Douda, K., & Kochánková, J. (2009). Development of alder carr after the abandonment of wet grasslands during the last 70 years. Annals of Forest Science, 66(7), 1-13.

Kochánková, J., & Mandák, B. (2009). How do population genetic parameters affect germination of the heterocarpic species Atriplex tatarica (Amaranthaceae)?. Annals of Botany, 103(8), 1303-1313.

2008

Šamonil, P., Král, K., Douda, J., & Šebková, B. (2008). Variability in forest floor at different spatial scales in a natural forest in the Carpathians: effect of windthrows and mesorelief. Canadian Journal of Forest Research, 38(10), 2596-2606.

Šamonil, P., Šebková, B., Douda, J., & Vrška, T. (2008). Role of position within the windthrow in forest floor chemistry in the flysch zone of the Carpathians. Canadian Journal of Forest Research, 38(6), 1646-1660.

Douda, J. (2008). Formalized classification of the vegetation of alder carr and floodplain forests in the Czech Republic. Preslia, 80(2), 199-224.

Kochánková, J., & Mandák, B. (2008). Biological flora of Central Europe: Atriplex tatarica L. Perspectives in Plant Ecology, Evolution and Systematics, 10(4), 217-229.